Get Organism (v1)

Method & Path

GET /api/v1/workspace/:workspaceId/labs/organisms/:organismId

Actual backend path: /v1/workspace/:workspaceId/labs/organisms/:organismId

Description

Get a single organism by ID.

Authentication

Required: JWT token in Authorization header

Required Permissions:

• labs.view

Headers

Header	Type	Required	Description
Authorization	string	Yes	Bearer token: Bearer <token>

Path Parameters

Parameter	Type	Required	Description
workspaceId	string	Yes	Workspace identifier (MongoDB ObjectId)
organismId	string	Yes	Organism identifier (MongoDB ObjectId)

Response 200 OK

{
  "organism": {
    "id": "507f1f77bcf86cd799439011",
    "workspaceId": "507f1f77bcf86cd799439012",
    "organismTitle": "Escherichia coli",
    "organismAbbr": "E. coli",
    "createdAt": "2025-01-15T10:00:00.000Z",
    "updatedAt": "2025-01-15T10:00:00.000Z",
    "deletedAt": null
  }
}

Common Errors

401 Unauthorized: Missing or invalid authentication token

403 Forbidden: Insufficient permissions (labs.view required)

404 Not Found: Organism or workspace not found

422 Validation Error: Invalid workspace ID or organism ID format